STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_0352ABC-type Fe3+-hydroxamate transport system, periplasmic component. (299 aa)    
Predicted Functional Partners:
XD68_1179
ABC-type cobalamin/Fe3+-siderophore transport system, ATPase component.
 
 0.990
XD68_1178
Transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.989
XD68_1515
Hemin ABC transporter, permease protein.
  
 0.986
XD68_1223
Putative tungsten formylmethanofuran dehydrogenase, subunit E.
 
    0.761
XD68_1073
Export ABC transporter permease protein.
  
 
 0.599
XD68_0095
Putative TIM-barrel fold metal-dependent hydrolase.
  
     0.464
XD68_0514
ABC-type Fe3+ transport system, permease component.
   
  
 0.463
XD68_0716
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
  
 
 0.446
hisI
Phosphoribosyl-AMP cyclohydrolase, phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.
   
   0.432
XD68_1373
Uncharacterized protein.
  
     0.413
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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