STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_0360FAD dependent oxidoreductase. (378 aa)    
Predicted Functional Partners:
XD68_0416
Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase component.
  
 0.994
XD68_0358
Putative oxidoreductase.
 
  0.985
XD68_0359
Putative oxidoreductase.
 
  
 
0.910
XD68_0093
Vitamin B12-dependent methionine synthase family protein.
   
 
 0.880
XD68_0417
4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
 
 0.857
XD68_0418
BFD-like (2Fe-2S) protein.
 
  
 0.852
XD68_0361
Ornithine cyclodeaminase.
  
 
 0.832
XD68_0237
Sulfur carrier protein ThiS.
 
 
 0.830
XD68_1060
Alanine-glyoxylate aminotransferase apoenzyme.
  
 
 0.803
XD68_1045
Threonine aldolase.
     
 0.790
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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