STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_09513-oxoacid CoA-transferase, A subunit. (126 aa)    
Predicted Functional Partners:
XD68_0297
Succinyl-CoA:3-ketoacid-coenzyme A transferase, B subunit.
 0.999
XD68_0950
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.940
XD68_1100
Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain).
    
  0.810
XD68_1316
Putative CoA-substrate-specific enzyme activase.
    
  0.810
XD68_1062
Phosphotransacetylase.
   
 
 0.750
XD68_0890
Short chain enoyl-CoA hydratase.
  
 
 0.663
XD68_1445
Enoyl-CoA hydratase/isomerase family protein.
  
 
 0.663
XD68_0891
Butyryl-CoA dehydrogenase.
  
 
 0.661
XD68_1631
Acetoacetate decarboxylase.
    
 0.652
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.639
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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