STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_1020Binding-protein-dependent transport systems inner membrane component. (285 aa)    
Predicted Functional Partners:
XD68_1019
Extracellular solute-binding protein family 1.
 
 0.999
XD68_1021
ABC-type sugar transport system, permease component.
 0.999
XD68_0513
Spermidine/putrescine ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.770
XD68_1226
Lipoprotein.
  
 
 0.712
XD68_1227
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
   
 
 0.681
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
    
 0.662
XD68_0446
Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
     
 0.651
XD68_1345
ABC-type multidrug transport system, permease component.
     
 0.649
XD68_0514
ABC-type Fe3+ transport system, permease component.
  
  
  0.644
XD68_0390
ABC transporter related protein; Belongs to the ABC transporter superfamily.
    
 0.641
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.