STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_1187Cell division initiation protein. (81 aa)    
Predicted Functional Partners:
XD68_1189
Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
  
  
 0.950
XD68_1188
Hypothetical protein.
  
  
 0.911
XD68_1190
Hypothetical protein.
       0.827
XD68_1192
HAD hydrolase, family IA.
       0.746
XD68_1191
Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.
  
    0.723
XD68_1193
Lactate dehydrogenase-like oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.721
murI
Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis.
       0.705
XD68_1195
Trap transporter solute receptor, taxi family.
       0.456
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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