STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_1202PTS system, fructose-specific IIBC component. (463 aa)    
Predicted Functional Partners:
XD68_0334
Hexose kinase, 1-phosphofructokinase family; Belongs to the carbohydrate kinase PfkB family.
 
 0.999
XD68_1200
Fructose-1-phosphate kinase; Belongs to the carbohydrate kinase PfkB family.
 
 0.999
XD68_1201
PTS system, nitrogen regulatory IIA component.
 
 0.999
XD68_0367
Fructose/tagatose bisphosphate aldolase.
  
 
 0.959
XD68_1199
Transcriptional regulator of sugar metabolism.
 
  
 0.939
XD68_1032
Uncharacterized protein.
 
 
 0.934
XD68_1031
PTS system lactose/cellobiose-specific transporter subunit IIB.
   
 
 0.874
XD68_0473
Transcriptional regulator/sugar kinase.
    
 0.863
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
     
 0.839
XD68_1495
PfkB domain protein.
     
 0.839
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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