STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD68_1505Acetyl-CoA synthetase (ADP forming), beta chain (AcdB). (104 aa)    
Predicted Functional Partners:
XD68_1326
Pyruvate-flavodoxin oxidoreductase.
  
 0.978
XD68_1681
Pyruvate ferredoxin oxidoreductase, alpha subunit.
  
 0.892
XD68_1504
Plasmid pRiA4b ORF-3 family protein.
       0.773
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
    
 0.643
XD68_0950
Acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
 
 0.633
XD68_1062
Phosphotransacetylase.
     
 0.625
XD68_0890
Short chain enoyl-CoA hydratase.
  
 
 0.622
XD68_1445
Enoyl-CoA hydratase/isomerase family protein.
  
 
 0.622
XD68_1343
Malic protein NAD-binding protein.
     
 0.610
XD68_1580
Glycine C-acetyltransferase.
     
 0.603
Your Current Organism:
Synergistales bacterium 5424
NCBI taxonomy Id: 1635272
Other names: S. bacterium 54_24, Synergistales bacterium 54_24
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