STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0011Hypothetical protein. (99 aa)    
Predicted Functional Partners:
XD76_0010
Methyltransferase type 11.
 
    
0.796
XD76_0012
Hypothetical protein.
       0.727
XD76_0417
4Fe-4S ferredoxin iron-sulfur binding domain protein.
  
 
 0.671
XD76_0734
Putative methyltransferase type 12.
   
 0.664
XD76_1207
Hypothetical protein.
   
 0.664
XD76_0917
Geranyltranstransferase.
  
 
 0.663
XD76_0939
3-oxoacyl-[acyl-carrier protein] reductase.
    
 0.657
XD76_1396
S-adenosylmethionine synthase.
  
 
 0.649
XD76_0240
Phytoene desaturase.
   
 
 0.647
XD76_0650
Aminomethyltransferase.
     
 0.639
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.