STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0072Zn-dependent hydrolase of the beta-lactamase fold-like protein. (213 aa)    
Predicted Functional Partners:
XD76_0071
50S ribosomal protein L27.
       0.782
XD76_0070
50S ribosomal protein L21.
       0.771
XD76_0069
Preprotein translocase, SecG subunit.
       0.762
XD76_0064
Fe-S oxidoreductase.
 
   
 0.757
XD76_0067
Phosphoglycerate kinase.
     
 0.749
XD76_0066
Glyceraldehyde-3-phosphate dehydrogenase, type I.
       0.747
XD76_0068
tpiA.
     
 0.736
XD76_0073
Rod shape-determining protein MreB.
       0.718
XD76_0065
Ribonuclease, Rne/Rng family.
     
 0.699
XD76_0466
Amino acid permease-associated region.
    
 0.699
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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