STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0290ABC transporter related protein. (241 aa)    
Predicted Functional Partners:
XD76_0291
ABC transporter permease.
 0.999
XD76_0289
Periplasmic solute binding protein.
 
 
 0.997
XD76_1521
Phosphate ABC transporter phosphate-binding protein.
     
 0.933
XD76_0051
ABC transporter related protein.
  
  
 
0.928
XD76_1403
Carbohydrate ABC transporter ATP-binding protein, CUT1 family.
  
  
 
0.927
XD76_1513
Carbohydrate ABC transporter permease.
     
 0.919
XD76_0477
Transcriptional regulator, MntR family.
  
 
 0.815
XD76_0806
Iron (III) ABC transporter, ATP-binding protein (HemV-1).
  
  
0.792
XD76_1062
Dipeptide-binding ABC transporter periplasmic substrate-binding component.
     
 0.781
XD76_1506
Oligopeptide-binding protein AppA.
     
 0.776
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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