STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0292Uncharacterized conserved protein UCP033563. (414 aa)    
Predicted Functional Partners:
XD76_0295
Aminotransferase class I and II.
    
  0.855
XD76_0303
UDP-N-acetylglucosamine 1-carboxyvinyltransferase.
  
    0.765
XD76_0293
Serine hydroxymethyltransferase.
       0.761
XD76_0294
MscS Mechanosensitive ion channel.
       0.761
XD76_0298
D-isomer specific 2-hydroxyacid dehydrogenase, catalytic component.
      0.760
XD76_0296
Hypothetical protein.
       0.751
XD76_0297
Hypothetical protein.
       0.751
XD76_0299
Metal dependent phosphohydrolase.
       0.751
XD76_0300
TPR repeat-containing protein.
       0.743
XD76_0302
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase.
  
    0.738
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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