STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0311Regulatory protein RecX. (203 aa)    
Predicted Functional Partners:
XD76_0312
Protein RecA.
  
 
 0.977
XD76_0314
CinA-like protein.
     
 0.889
XD76_1461
DNA repair protein radA.
  
  
 0.844
XD76_0324
Twitching motility pilus retraction ATPase.
     
 0.808
XD76_0325
Elongation factor P.
     
 0.803
XD76_0313
2'-5' RNA ligase.
     
 0.802
XD76_0322
Chromosomal replication initiator protein dnaA.
     
 0.799
XD76_0315
Phosphatidylglycerophosphatase A.
       0.791
XD76_0318
Chemotaxis response regulator protein-glutamate methylesterase.
       0.781
XD76_0309
Uncharacterized protein.
       0.773
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.