STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0385Peptidoglycan-binding LysM. (501 aa)    
Predicted Functional Partners:
XD76_0333
Type IV pilus assembly protein PilM.
  
 
   0.895
XD76_0329
Type II and III secretion system protein.
 
 
 
 0.894
XD76_0332
Type IV pilus biogenesis protein PilN.
  
 
   0.850
XD76_0331
Uncharacterized protein.
  
 
   0.843
XD76_0254
Alpha,alpha-trehalose-phosphate synthase/trehalose-phosphatase.
   
  
 0.804
XD76_0756
Type IV pilus assembly protein PilC.
    
   0.784
XD76_0387
Alanine racemase.
       0.782
XD76_0384
3-methyl-2-oxobutanoate hydroxymethyltransferase.
       0.773
XD76_0386
Hypothetical protein.
       0.773
XD76_0388
Hypothetical protein.
       0.773
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.