STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0455Methylthioribose-1-phosphate isomerase. (344 aa)    
Predicted Functional Partners:
XD76_0957
Rhamnulose-1-phosphate aldolase.
  
 
 0.855
XD76_0172
Adenine phosphoribosyltransferase.
 
    0.826
XD76_0453
Hypothetical protein.
   
   0.824
XD76_0452
Sorbitol dehydrogenase.
  
    0.790
XD76_1114
Purine nucleoside phosphorylase.
  
 
 0.786
XD76_0454
Glycosyltransferase.
       0.773
XD76_0456
Hypothetical protein.
       0.773
XD76_1435
Ribulose-phosphate 3-epimerase.
  
   0.685
XD76_0457
Hypothetical protein.
       0.668
XD76_0458
Hypothetical protein.
       0.658
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.