STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0500Penicillin-binding protein, 1A family. (708 aa)    
Predicted Functional Partners:
XD76_0076
Penicillin-binding protein 2.
  
 
 0.901
XD76_0077
Rod shape-determining protein RodA.
  
  
 0.840
XD76_0509
Peptidase M23.
 
   
 0.823
XD76_0722
Cell division protein FtsW.
  
  
 0.814
XD76_0727
Stage V sporulation protein D.
  
 
0.786
XD76_0501
Flagellar motor rotation protein MotB.
  
    0.771
XD76_0502
Hypothetical protein.
       0.768
XD76_0381
Beta-lactamase class C, penicillin binding protein.
     
 0.738
XD76_0793
Hypothetical protein.
    
 0.735
XD76_1252
Penicillin-binding protein transpeptidase domain-containing protein.
    
 0.735
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.