STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_0729Ribosomal RNA small subunit methyltransferase H. (274 aa)    
Predicted Functional Partners:
XD76_0731
Protein MraZ.
  
  
 0.970
XD76_0726
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase.
  
 0.900
XD76_0725
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase.
 
  
 0.888
XD76_0727
Stage V sporulation protein D.
 
  
 0.886
XD76_0717
Cell division protein ftsA.
 
  
 0.878
XD76_0720
UDP-N-acetylmuramate--L-alanine ligase.
 
  
 0.866
XD76_0719
UDP-N-acetylenolpyruvoylglucosamine reductase.
 
   
 0.859
XD76_0953
tRNA pseudouridine synthase A.
 
 
 
 0.859
XD76_0721
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
  
  
 0.844
XD76_0034
30S ribosomal protein S15.
   
 
 0.843
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.