STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_1011Digeranylgeranylglycerophospholipid reductase 2. (288 aa)    
Predicted Functional Partners:
XD76_1012
4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.
  
 
 0.967
XD76_0892
4-Hydroxybenzoate polyprenyltransferase.
 
 
 0.912
XD76_0943
Electron transfer flavoprotein alpha/beta-subunit.
  
 
 0.892
XD76_0944
Putative electron transfer flavoprotein alpha-subunit (EtfA and 4Fe-4S ferredoxin modules).
  
 
 0.863
XD76_0239
Phytoene/squalene synthetase.
 
 
 0.828
XD76_0041
UbiA prenyltransferase.
 
 
 0.817
XD76_0240
Phytoene desaturase.
  
 
 0.813
XD76_0917
Geranyltranstransferase.
  
 0.799
XD76_1013
Alanine--tRNA ligase.
  
    0.780
XD76_1014
Hypothetical protein.
       0.773
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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