STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_1073Metallophosphoesterase. (244 aa)    
Predicted Functional Partners:
XD76_1265
Ankyrin repeat protein.
    
 0.944
XD76_1074
N utilization substance protein B-like protein.
 
     0.825
XD76_1068
Glycosyltransferase-like protein.
 
     0.815
XD76_1076
Riboflavin biosynthesis protein RibBA.
       0.808
XD76_1078
Riboflavin biosynthesis protein RibD.
       0.807
XD76_1071
Metallophosphoesterase.
     
 0.794
XD76_1075
6,7-dimethyl-8-ribityllumazine synthase.
       0.785
XD76_1077
Riboflavin synthase, alpha subunit.
       0.785
XD76_1069
Biotin--acetyl-CoA-carboxylase ligase.
       0.784
XD76_1066
Putative periplasmic solute-binding protein.
       0.773
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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