STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_1124Histidine--tRNA ligase. (422 aa)    
Predicted Functional Partners:
XD76_1125
Aspartate--tRNA ligase.
 
  
 0.978
XD76_1130
Conserved uncharacterized protein.
    
  0.847
XD76_1131
Uncharacterized protein.
    
  0.841
XD76_1126
Peptide deformylase.
  
  
 0.821
XD76_1121
ATP-dependent protease ATPase subunit HslU.
  
    0.805
XD76_1132
Putative Sugar ABC transporter, periplasmic sugar-binding protein.
     
 0.797
XD76_1119
Diguanylate cyclase/phosphodiesterase.
  
    0.792
XD76_1133
Periplasmic serine protease.
  
  
 0.790
XD76_0959
Glycyl-tRNA synthetase alpha subunit.
  
  
 0.788
XD76_1148
Serine--tRNA ligase.
 
 0.785
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.