STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_1496DNA polymerase III, delta prime subunit. (333 aa)    
Predicted Functional Partners:
XD76_0499
DNA polymerase III beta subunit.
   
 0.992
XD76_0709
Hypothetical protein.
   
 0.974
XD76_1726
DNA polymerase III, alpha subunit.
  
 0.969
XD76_1457
Replicative DNA helicase.
 
 
 0.942
XD76_1065
DNA polymerase III, subunit gamma/tau.
  
  
 
0.941
XD76_1002
Single-stranded DNA-binding protein.
  
 
 0.935
XD76_1498
Methionine--tRNA ligase.
     
 0.877
XD76_1497
PSP1 domain protein.
  
   0.824
XD76_1349
Helicase c2.
  
 0.807
XD76_1500
Ribosomal RNA adenine dimethylase.
     
 0.801
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.