STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD76_1537SucC2: succinyl-CoA ligase, beta subunit. (381 aa)    
Predicted Functional Partners:
XD76_1538
Succinyl-CoA ligase [ADP-forming] subunit alpha.
 0.999
XD76_1534
FAD dependent oxidoreductase.
  
 
 0.898
XD76_0346
NADH:flavin oxidoreductase.
  
 0.887
XD76_1540
2-oxoglutarate ferredoxin oxidoreductase, alpha subunit.
  
 
 0.882
XD76_1541
2-oxoglutarate ferredoxin oxidoreductase, beta subunit.
  
 
 0.881
XD76_1609
NADP-dependent malic enzyme.
  
 
 0.879
XD76_1542
2-oxoglutarate ferredoxin oxidoreductase, gamma subunit.
  
 
 0.876
XD76_0871
Dihydrolipoyl dehydrogenase.
  
 0.869
XD76_0766
KorB2: 2-oxoglutarate synthase, subunit B.
  
 
 0.854
XD76_1763
Hypothetical protein.
  
 
 0.850
Your Current Organism:
candidate division TA06 bacterium 32111
NCBI taxonomy Id: 1635278
Other names: c. division TA06 bacterium 32_111, candidate division TA06 bacterium 32_111
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