STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD44_0497Ketoisovalerate oxidoreductase subunit VorC. (82 aa)    
Predicted Functional Partners:
XD44_0498
Ketoisovalerate oxidoreductase subunit VorB.
 
 
 0.997
XD44_0499
Ketoisovalerate oxidoreductase subunit VorA.
 
 
 0.996
ilvE
Branched chain amino acid aminotransferase apoenzyme; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.
    
  0.949
XD44_0496
Acyl-CoA synthetase.
 
 
  0.926
XD44_0805
Thiol:fumarate reductase, subunit A.
  
 0.908
XD44_1369
NADP-reducing hydrogenase, subunit A.
   
 0.886
gatD
Glutamyl-tRNA(Gln) amidotransferase subunit D; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
 
 
  0.866
gatE
Glutamyl-tRNA(Gln) amidotransferase subunit E; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
 
  
  0.857
XD44_0495
Hypothetical protein.
 
  
 0.853
XD44_1278
Pyruvate synthase subunit PorB.
  
 
 0.697
Your Current Organism:
Methanobacteriaceae archaeon
NCBI taxonomy Id: 1635284
Other names: M. archaeon 41_258, Methanobacteriaceae archaeon 41_258
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.