STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0044Polyamine-transporting ATPase. (243 aa)    
Predicted Functional Partners:
XD60_0041
Uncharacterized protein.
 
 0.995
XD60_0043
Uncharacterized protein.
 0.995
XD60_0436
Hypothetical protein.
 0.995
XD60_0180
Hypothetical protein.
 0.994
XD60_1803
ABC transporter system permease protein.
 0.993
XD60_0042
Uncharacterized protein.
 
 
 
 0.958
XD60_0247
Cystine transport system permease protein.
 
 
 
  0.917
XD60_1801
RND family efflux transporter MFP subunit.
 
 0.917
XD60_1346
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
   
 
0.905
XD60_0483
GlnP2.
 
 
 
  0.855
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.