STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0138Periplasmic osmoprotectant binding protein. (316 aa)    
Predicted Functional Partners:
XD60_0139
Hypothetical protein.
 
 0.998
XD60_0141
Binding-protein-dependent transport systems inner membrane component.
 
 0.998
XD60_0140
Glycine betaine/L-proline ABC transporter, ATPase subunit.
 0.997
XD60_0557
Extracellular solute-binding protein family 1.
   
 
 0.821
XD60_0076
Phosphate ABC transporter substrate-binding protein, PhoT family.
  
 
 0.820
XD60_0926
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
     
 0.811
XD60_0246
ABC transport system protein.
 
   
  0.809
XD60_0878
Transporter.
   
  0.809
XD60_1347
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
 
   
  0.809
XD60_0244
Extracellular solute-binding protein.
     
 0.677
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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