STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0210UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase. (428 aa)    
Predicted Functional Partners:
XD60_0399
D-alanine--D-alanine ligase.
 
 0.984
XD60_1306
Alanine racemase.
  
 0.981
XD60_0789
Phospho-N-acetylmuramoyl-pentapeptide- transferase.
 
 0.980
XD60_1000
UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase.
 
 
 0.976
XD60_0998
UDP-N-acetylmuramoylalanine--D-glutamate ligase.
 
 
 0.970
XD60_1001
UDP-N-acetylmuramate--L-alanine ligase.
 
 
 0.967
XD60_1795
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase.
 
 
0.932
XD60_1002
UDP-N-acetylenolpyruvoylglucosamine reductase.
 
 
 0.929
XD60_1682
D,D-heptose 1,7-bisphosphate phosphatase.
    
 0.890
XD60_0999
Cell division protein FtsW.
 
 0.870
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.