STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0252Homocitrate synthase, mitochondrial. (391 aa)    
Predicted Functional Partners:
XD60_0818
3-isopropylmalate dehydratase, small subunit.
 
 
 0.977
XD60_0821
Homoaconitate hydratase family protein.
 
 
 0.975
XD60_1184
Homoisocitrate dehydrogenase.
 0.848
XD60_0250
N-acetyl-ornithine/N-acetyl-lysine deacetylase.
 
  
 0.815
XD60_1181
Branched-chain amino acid aminotransferase.
 
 0.804
XD60_0251
Acetylornithine/acetyl-lysine aminotransferase.
     
 0.803
XD60_0248
Carbamoyl-phosphate synthase large chain.
  
  
 0.800
XD60_1456
3-isopropylmalate dehydratase large subunit.
 
 0.800
XD60_0254
Lysine biosynthesis protein LysX.
 
     0.798
XD60_0253
Acetylglutamate kinase.
     
 0.797
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.