STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0471ATP-citrate synthase (ATP-citrate (Pro-S-)-lyase)(Citrate cleavage enzyme). (426 aa)    
Predicted Functional Partners:
XD60_0470
ATP-citrate lyase/succinyl-CoA ligase.
 0.999
XD60_0739
Succinyl-CoA ligase [ADP-forming] subunit alpha.
 0.997
XD60_0472
Isocitrate dehydrogenase.
  
  
 0.933
XD60_0622
2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide succinyltransferase.
  
 0.923
XD60_0473
Aconitate hydratase.
  
 0.919
XD60_1052
Glycine hydroxymethyltransferase.
  
  
 0.892
XD60_1367
Hydro-lyase family enzyme, Fe-S type, tartrate/fumarate subfamily.
  
 
 0.843
XD60_1715
Pyruvate flavodoxin/ferredoxin oxidoreductase domain protein.
  
 
 0.823
XD60_0220
NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit.
  
 0.818
XD60_0824
Isocitrate/isopropylmalate dehydrogenase.
  
 0.740
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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