STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0508D,D-dipeptide ABC transport system substrate binding protein DdpA. (539 aa)    
Predicted Functional Partners:
XD60_0509
D,D-dipeptide ABC transport system permease protein DdpB.
 
  0.872
XD60_0510
Binding-protein-dependent transport systems inner membrane component.
 
  0.826
XD60_0511
Oligopeptide/dipeptide ABC transporter, ATPase subunit.
  
 
  0.777
XD60_0512
D,D-dipeptide ABC transport system ATP-binding protein DppF.
  
 
  0.777
XD60_1091
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA.
  
     0.764
XD60_0134
ABC-type dipeptide/oligopeptide/nickel transport system, periplasmic component.
  
     0.689
XD60_1730
ABC transporter, permease protein.
 
  0.681
XD60_0885
D,D-dipeptide ABC transport system permease protein DdpB.
 
  0.663
XD60_0886
D,D-dipeptide ABC transport system permease protein DppC.
 
  0.661
XD60_0926
Oligopeptide ABC superfamily ATP binding cassette transporter, binding protein.
 
 
0.622
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.