STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0543Transcriptional regulator, Crp/Fnr family. (250 aa)    
Predicted Functional Partners:
XD60_0541
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta.
    
  0.841
XD60_0542
Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha.
    
  0.841
XD60_1166
Multi-sensor signal transduction histidine kinase.
 
 
 0.824
XD60_0540
Uncharacterized protein.
       0.774
XD60_1579
DNA-directed RNA polymerase subunit beta.
    
 
 0.770
XD60_1096
DNA-directed RNA polymerase subunit alpha.
    
   0.755
XD60_0931
Peptidil-prolyl cis-trans isomerase.
   
 0.751
XD60_0215
Hypothetical protein.
   
 0.741
XD60_0872
Multi-sensor signal transduction histidine kinase.
 
 0.738
XD60_1127
DNA-directed RNA polymerase subunit beta'.
    
 
 0.734
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.