STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0692Short-chain dehydrogenase/reductase SDR. (256 aa)    
Predicted Functional Partners:
XD60_0001
N-acyl-D-amino-acid deacylase.
  
     0.775
XD60_0693
Alcohol dehydrogenase.
 
 
 0.752
XD60_0694
Hypothetical protein.
 
 
 0.749
XD60_0690
Ribokinase-like domain-containing protein.
 
  0.703
XD60_1052
Glycine hydroxymethyltransferase.
  
 0.692
XD60_1064
Malonyl CoA-acyl carrier protein transacylase.
 
 0.668
XD60_0530
Pyruvate kinase.
   
 0.660
XD60_0277
1-phosphofructokinase.
  
 
  0.652
XD60_0866
3-oxoacyl-[acyl-carrier-protein] synthase 2.
 
 0.651
XD60_0220
NADH:ubiquinone oxidoreductase, nadh-binding (51 kd) subunit.
    
 0.621
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.