STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_0962NusB antitermination factor. (130 aa)    
Predicted Functional Partners:
XD60_1123
30S ribosomal protein S10.
   
 0.973
XD60_0935
N utilization substance protein A.
 
 0.954
XD60_1579
DNA-directed RNA polymerase subunit beta.
 
 0.902
XD60_1584
Transcriptional antiterminator NusG.
  
 0.896
XD60_1127
DNA-directed RNA polymerase subunit beta'.
 
 0.891
XD60_1096
DNA-directed RNA polymerase subunit alpha.
   
 0.884
XD60_0317
Riboflavin biosynthesis protein RibBA.
   
 0.852
XD60_0966
Elongation factor P.
 
  
 0.846
XD60_1097
30S ribosomal protein S4.
   
 
 0.806
XD60_0960
PHP domain protein.
  
    0.792
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.