STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_111750S ribosomal protein L22. (84 aa)    
Predicted Functional Partners:
XD60_1104
50S ribosomal protein L15.
  
 0.999
XD60_1105
SSU ribosomal protein S5p (S2e).
 
 0.999
XD60_1106
50S ribosomal protein L18.
 
 0.999
XD60_1107
50S ribosomal protein L6.
 
 0.999
XD60_1108
30S ribosomal protein S8.
 
 0.999
XD60_1110
50S ribosomal protein L5.
 
 0.999
XD60_1111
50S ribosomal protein L24.
  
 0.999
XD60_1112
50S ribosomal protein L14.
 
 0.999
XD60_1113
30S ribosomal protein S17.
 
 
 0.999
XD60_1114
50S ribosomal protein L29.
  
 0.999
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.