STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_1287Mandelate racemase/muconate lactonizing protein. (369 aa)    
Predicted Functional Partners:
XD60_1288
8-amino-7-oxononanoate synthase.
       0.774
XD60_1281
Radical SAM domain protein.
    
  0.752
XD60_0530
Pyruvate kinase.
     
 0.742
XD60_1276
Isopentenyl-diphosphate delta-isomerase, type 2.
    
 0.690
XD60_1284
Bacterial regulatory s, luxR family protein.
  
   0.684
XD60_1285
Putative two-component sensor.
       0.668
XD60_1286
Secretion chaperone CsaA.
       0.668
XD60_1290
ABC-type dipeptide/oligopeptide/nickel transport system, permease component.
  
    0.652
XD60_1289
Binding-protein-dependent transport systems inner membrane component.
  
    0.651
XD60_0423
Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
    
 0.583
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.