STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_1488Phosphoribulokinase/uridine kinase. (476 aa)    
Predicted Functional Partners:
XD60_0915
Uracil phosphoribosyltransferase.
  
 0.937
XD60_1612
Glyceraldehyde 3-phosphate dehydrogenase.
   
 0.915
XD60_1102
Adenylate kinase.
 
 0.859
XD60_0344
Uridylate kinase.
  
 
 0.825
XD60_0548
Deoxycytidine triphosphate deaminase.
    
 0.792
XD60_0663
Thymidylate kinase.
  
 
 0.781
XD60_0365
Cytidine deaminase.
    
 0.766
XD60_0530
Pyruvate kinase.
   
 0.766
XD60_1376
Chaperone protein DnaJ.
  
 0.758
XD60_0734
Guanylate kinase.
   
 0.755
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.