STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_1607Peptidase membrane zinc metallopeptidase. (227 aa)    
Predicted Functional Partners:
XD60_1608
Ribulose-phosphate 3-epimerase.
       0.797
XD60_1609
Riboflavin biosynthesis protein RibD.
       0.782
XD60_1610
Pyridoxal biosynthesis lyase PdxS.
       0.773
XD60_1611
Glutamine amidotransferase subunit PdxT.
       0.773
XD60_1612
Glyceraldehyde 3-phosphate dehydrogenase.
       0.773
XD60_1616
RNA polymerase sigma factor.
       0.730
XD60_1614
Zn-dependent hydrolase, glyoxylase.
  
    0.729
XD60_1615
DNA primase.
       0.729
XD60_1613
Phosphoribosyltransferase.
       0.728
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.