STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_1736DNA ligase. (671 aa)    
Predicted Functional Partners:
XD60_1681
Leucine--tRNA ligase.
 
 
 
 0.878
XD60_0486
DNA topoisomerase.
   
 
 0.868
XD60_0849
DNA polymerase I.
 
   
 0.793
XD60_1737
Hypothetical protein.
   
   0.785
XD60_1738
Phosphate starvation-inducible protein PhoH.
       0.773
XD60_1364
Uncharacterized protein.
  
  
 0.770
XD60_0655
DNA polymerase III subunit alpha.
 
  
 0.711
XD60_0275
DNA helicase, Rad3.
   
 
 0.708
XD60_1739
MiaB-like tRNA modifying enzyme.
       0.703
XD60_1740
Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B.
       0.697
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.