STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XD60_1779Patatin. (284 aa)    
Predicted Functional Partners:
XD60_0559
Glycerol-3-phosphate acyltransferase.
    
  0.620
XD60_1781
rRNA methylase SpoU.
       0.507
XD60_1782
Deoxyhypusine synthase-like protein.
       0.506
XD60_1783
Putative pyruvoyl-dependent arginine decarboxylase.
       0.506
XD60_1784
Hypothetical protein.
       0.490
XD60_0533
Hypothetical protein.
  
 0.446
XD60_0526
Long-chain acyl-CoA synthetase.
  
 
 0.428
Your Current Organism:
Acetothermia bacterium 6432
NCBI taxonomy Id: 1635286
Other names: A. bacterium 64_32, Acetothermia bacterium 64_32
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.