Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMV36103.1 | AMV36104.1 | VT85_01575 | VT85_01580 | Neutral/alkaline non-lysosomal ceramidase. | Hypothetical protein. | 0.557 |
AMV36103.1 | AMV38998.1 | VT85_01575 | VT85_16295 | Neutral/alkaline non-lysosomal ceramidase. | Hypothetical protein. | 0.520 |
AMV36103.1 | pulG_3 | VT85_01575 | VT85_01585 | Neutral/alkaline non-lysosomal ceramidase. | Type II secretion system protein G precursor. | 0.546 |
AMV36104.1 | AMV36103.1 | VT85_01580 | VT85_01575 | Hypothetical protein. | Neutral/alkaline non-lysosomal ceramidase. | 0.557 |
AMV36104.1 | pulG_3 | VT85_01580 | VT85_01585 | Hypothetical protein. | Type II secretion system protein G precursor. | 0.650 |
AMV37654.1 | AMV37656.1 | VT85_09470 | VT85_09485 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | Competence protein A. | 0.447 |
AMV37654.1 | AMV38844.1 | VT85_09470 | VT85_15525 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.774 |
AMV37654.1 | AMV38998.1 | VT85_09470 | VT85_16295 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.556 |
AMV37654.1 | AMV39621.1 | VT85_09470 | VT85_19455 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | ABC-2 family transporter protein. | 0.683 |
AMV37654.1 | AMV40607.1 | VT85_09470 | VT85_24465 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | BNR/Asp-box repeat protein. | 0.757 |
AMV37654.1 | AMV40723.1 | VT85_09470 | VT85_25045 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | Hypothetical protein. | 0.771 |
AMV37654.1 | pulG_3 | VT85_09470 | VT85_01585 | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | Type II secretion system protein G precursor. | 0.649 |
AMV37656.1 | AMV37654.1 | VT85_09485 | VT85_09470 | Competence protein A. | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | 0.447 |
AMV37656.1 | AMV38998.1 | VT85_09485 | VT85_16295 | Competence protein A. | Hypothetical protein. | 0.474 |
AMV37656.1 | AMV39930.1 | VT85_09485 | VT85_21030 | Competence protein A. | Hypothetical protein. | 0.673 |
AMV37656.1 | pulG_3 | VT85_09485 | VT85_01585 | Competence protein A. | Type II secretion system protein G precursor. | 0.551 |
AMV38844.1 | AMV37654.1 | VT85_15525 | VT85_09470 | Hypothetical protein. | Outer membrane porin HofQ; Belongs to the bacterial secretin family. | 0.774 |
AMV38844.1 | AMV38998.1 | VT85_15525 | VT85_16295 | Hypothetical protein. | Hypothetical protein. | 0.569 |
AMV38844.1 | AMV39621.1 | VT85_15525 | VT85_19455 | Hypothetical protein. | ABC-2 family transporter protein. | 0.706 |
AMV38844.1 | AMV40607.1 | VT85_15525 | VT85_24465 | Hypothetical protein. | BNR/Asp-box repeat protein. | 0.765 |
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