Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AMV38007.1 | AMV38008.1 | VT85_11260 | VT85_11265 | Hypothetical protein. | HEAT repeat protein. | 0.618 |
AMV38007.1 | nuc | VT85_11260 | VT85_11270 | Hypothetical protein. | Thermonuclease precursor. | 0.617 |
AMV38007.1 | sttH | VT85_11260 | VT85_11275 | Hypothetical protein. | Streptothricin hydrolase. | 0.403 |
AMV38008.1 | AMV38007.1 | VT85_11265 | VT85_11260 | HEAT repeat protein. | Hypothetical protein. | 0.618 |
AMV38008.1 | nuc | VT85_11265 | VT85_11270 | HEAT repeat protein. | Thermonuclease precursor. | 0.781 |
AMV38008.1 | sttH | VT85_11265 | VT85_11275 | HEAT repeat protein. | Streptothricin hydrolase. | 0.492 |
nuc | AMV38007.1 | VT85_11270 | VT85_11260 | Thermonuclease precursor. | Hypothetical protein. | 0.617 |
nuc | AMV38008.1 | VT85_11270 | VT85_11265 | Thermonuclease precursor. | HEAT repeat protein. | 0.781 |
nuc | sttH | VT85_11270 | VT85_11275 | Thermonuclease precursor. | Streptothricin hydrolase. | 0.489 |
sttH | AMV38007.1 | VT85_11275 | VT85_11260 | Streptothricin hydrolase. | Hypothetical protein. | 0.403 |
sttH | AMV38008.1 | VT85_11275 | VT85_11265 | Streptothricin hydrolase. | HEAT repeat protein. | 0.492 |
sttH | nuc | VT85_11275 | VT85_11270 | Streptothricin hydrolase. | Thermonuclease precursor. | 0.489 |