STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV38167.1Colicin V production protein. (401 aa)    
Predicted Functional Partners:
AMV38168.1
Ribosome-associated protein.
 
    0.811
AMV36116.1
Hypothetical protein.
 
    0.784
purF
Amidophosphoribosyltransferase precursor; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.
  
  
 0.782
AMV38644.1
Hypothetical protein.
 
    0.781
AMV39314.1
Hypothetical protein.
 
     0.779
AMV38259.1
Hypothetical protein.
  
     0.774
AMV39287.1
Hypothetical protein.
  
     0.774
AMV40745.1
Hypothetical protein.
  
     0.774
AMV37121.1
Hypothetical protein.
  
     0.773
AMV37274.1
Hypothetical protein.
  
     0.773
Your Current Organism:
Planctomyces sp. SHPL62
NCBI taxonomy Id: 1636152
Other names: P. sp. SH-PL62, Planctomyces sp. SH-PL62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.