STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV38754.1Endonuclease/Exonuclease/phosphatase family protein. (335 aa)    
Predicted Functional Partners:
AMV38617.1
Hypothetical protein.
 
     0.661
AMV39078.1
Beta-galactosidase.
 
     0.604
AMV37677.1
Hypothetical protein; SLA1 homology domain 1, SHD1.
  
     0.529
AMV37596.1
Hypothetical protein.
 
     0.493
AMV38167.1
Colicin V production protein.
  
    0.479
AMV40785.1
Hypothetical protein.
  
     0.479
AMV39356.1
Hypothetical protein.
  
     0.459
AMV40521.1
Glycosyl hydrolase family 109 protein 1 precursor.
  
    0.454
AMV35859.1
Hypothetical protein.
  
     0.442
AMV39358.1
Methyltransferase domain protein.
  
     0.436
Your Current Organism:
Planctomyces sp. SHPL62
NCBI taxonomy Id: 1636152
Other names: P. sp. SH-PL62, Planctomyces sp. SH-PL62
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.