STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AMV40618.1Transposase DDE domain protein. (268 aa)    
Predicted Functional Partners:
AMV39230.1
Transposase DDE domain protein.
  
     0.726
AMV40502.1
Hypothetical protein.
  
     0.701
AMV37836.1
Hypothetical protein.
  
     0.697
AMV39362.1
Hypothetical protein.
  
     0.679
AMV39222.1
Hypothetical protein.
  
     0.677
AMV37408.1
Hypothetical protein.
  
     0.668
AMV39213.1
Hypothetical protein.
  
     0.668
AMV40152.1
Hypothetical protein.
  
     0.668
AMV40203.1
Hypothetical protein.
  
     0.668
AMV39207.1
Hypothetical protein.
  
     0.641
Your Current Organism:
Planctomyces sp. SHPL62
NCBI taxonomy Id: 1636152
Other names: P. sp. SH-PL62, Planctomyces sp. SH-PL62
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.