STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000980375_00661Unannotated protein. (248 aa)    
Predicted Functional Partners:
GCA_000980375_00389
Unannotated protein.
  
  
 0.864
GCA_000980375_00073
Unannotated protein.
   
   0.755
GCA_000980375_00662
Unannotated protein.
    
  0.740
GCA_000980375_00664
Unannotated protein.
       0.706
GCA_000980375_00294
Unannotated protein.
   
 
 0.695
GCA_000980375_00663
Unannotated protein.
       0.659
GCA_000980375_01146
Unannotated protein.
  
 
 0.604
GCA_000980375_00660
Unannotated protein.
       0.561
GCA_000980375_00244
Unannotated protein.
   
   0.512
GCA_000980375_00976
Unannotated protein.
  
   0.478
Your Current Organism:
Clostridium sp. K4410MGS306
NCBI taxonomy Id: 1637501
Other names: C. sp. K4410.MGS-306, Clostridium sp. K4410.MGS-306
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.