STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC82479.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (758 aa)    
Predicted Functional Partners:
AKC83876.1
Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.921
AKC82746.1
Nucleoside diphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NDK family.
    
 0.919
AKC83585.1
Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.
   
 0.906
AKC81948.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.887
AKC81910.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.884
AKC81713.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.856
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
    
 0.817
AKC83147.1
Hypothetical protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.
   
 0.808
AKC82438.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
AKC84160.1
GTP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.800
Your Current Organism:
Verrucomicrobia bacterium IMCC26134
NCBI taxonomy Id: 1637999
Other names: V. bacterium IMCC26134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.