STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC82629.1Pilus assembly protein PilB; Derived by automated computational analysis using gene prediction method: Protein Homology. (565 aa)    
Predicted Functional Partners:
AKC82628.1
Pilus assembly protein PilC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.940
AKC82564.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.882
AKC83215.1
Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.879
AKC82604.1
General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.741
AKC84026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.727
AKC82562.1
Type II secretory pathway, component PulD; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.705
AKC82630.1
Twitching motility protein pilT; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
0.689
AKC83635.1
Peptidase A24; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.677
AKC82631.1
Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.566
AKC82381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.
 
  
 0.492
Your Current Organism:
Verrucomicrobia bacterium IMCC26134
NCBI taxonomy Id: 1637999
Other names: V. bacterium IMCC26134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.