STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC83033.1Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. (364 aa)    
Predicted Functional Partners:
AKC81753.1
2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.996
AKC82387.1
Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.851
AKC83044.1
Gluconate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.844
AKC81854.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.832
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
    
 0.818
AKC81856.1
3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.817
AKC83392.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  0.817
AKC81855.1
D-galactarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.810
AKC82661.1
L-ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.808
AKC82681.1
Transport protein RbsD/FucU; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.792
Your Current Organism:
Verrucomicrobia bacterium IMCC26134
NCBI taxonomy Id: 1637999
Other names: V. bacterium IMCC26134
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.