STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AKC83174.1GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (127 aa)    
Predicted Functional Partners:
AKC83175.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.865
AKC83176.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
AKC83177.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.709
AKC84090.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.538
AKC82425.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.
   
    0.465
AKC84103.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.434
Your Current Organism:
Verrucomicrobia bacterium IMCC26134
NCBI taxonomy Id: 1637999
Other names: V. bacterium IMCC26134
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.