STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971375_01433Unannotated protein. (470 aa)    
Predicted Functional Partners:
GCA_000971375_01434
Unannotated protein.
 
 0.969
GCA_000971375_01435
Unannotated protein.
 
  0.955
GCA_000971375_00717
Unannotated protein.
  
 0.913
GCA_000971375_01706
Unannotated protein.
  
 0.876
GCA_000971375_02142
Unannotated protein.
  
 0.876
GCA_000971375_01436
Unannotated protein.
 
     0.859
GCA_000971375_01013
Unannotated protein.
 
 0.837
GCA_000971375_01499
Unannotated protein.
 
 0.834
GCA_000971375_01705
Unannotated protein.
 
  0.833
GCA_000971375_01878
Unannotated protein.
 
  0.822
Your Current Organism:
Lysinimicrobium aestuarii
NCBI taxonomy Id: 1638982
Other names: DSM 28144, L. aestuarii, Lysinimicrobium aestuarii Hamada et al. 2015, Lysinimicrobium sp. HI12-100, Lysinimicrobium sp. HI12-104, Lysinimicrobium sp. HI12-140, Lysinimicrobium sp. NBRC 109392, Lysinimicrobium sp. NBRC 109398, Lysinimicrobium sp. NBRC 110048, NBRC 109392, strain HI12-104
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.