STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000971195_01694Unannotated protein. (498 aa)    
Predicted Functional Partners:
GCA_000971195_00611
Unannotated protein.
  
 0.999
GCA_000971195_01227
Unannotated protein.
   
  0.999
GCA_000971195_01682
Unannotated protein.
 
 0.999
GCA_000971195_01683
Unannotated protein.
 
 0.999
GCA_000971195_01684
Unannotated protein.
 
 0.999
GCA_000971195_01685
Unannotated protein.
 
 0.999
GCA_000971195_01686
Unannotated protein.
  
 0.999
GCA_000971195_01687
Unannotated protein.
  
 0.999
GCA_000971195_01688
Unannotated protein.
 
 0.999
GCA_000971195_01689
Unannotated protein.
 
 0.999
Your Current Organism:
Lysinimicrobium soli
NCBI taxonomy Id: 1638987
Other names: DSM 28151, L. soli, Lysinimicrobium soli Hamada et al. 2015, Lysinimicrobium sp. HI12-122, Lysinimicrobium sp. NBRC 109394, NBRC 109394, strain HI12-122
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.