STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KRT67040.1Cytochrome b subunit of formate dehydrogenase-like protein. (670 aa)    
Predicted Functional Partners:
mopA
Protein MopA, molybdopterin oxidoreductase, iron-sulfur binding subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
 
 0.997
KRT67044.1
4Fe-4S ferredoxin iron-sulfur binding domain protein, tetrathionate reductase subunit B.
 
 0.913
KRT67039.1
Cytochrome c family protein.
 
  
  0.896
KRT65949.1
Cyclic nucleotide-binding protein.
  
 0.837
KRT67043.1
Polysulfide reductase NrfD.
 
     0.799
KRT64758.1
Allosteric NADP-dependent malic enzyme, malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
   
 
 0.669
KRT67041.1
Hypothetical protein.
       0.648
KRT67042.1
Coenzyme PQQ synthesis protein.
       0.648
ddhB
Respiratory nitrate reductase beta chain.
  
  
  0.634
narZ
Respiratory nitrate reductase alpha chain; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
  
  0.608
Your Current Organism:
Dadabacteria bacterium CSP12
NCBI taxonomy Id: 1640508
Other names: C. Dadabacteria bacterium CSP1-2, Candidatus Dadabacteria bacterium CSP1-2, bacterium CSP1-2
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